STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZC24569.1Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology. (338 aa)    
Predicted Functional Partners:
KZC23839.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.596
KZC23831.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.577
KZC23842.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.566
KZC24570.1
MAPEG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
KZC23818.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.471
KZC22018.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
KZC23259.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.445
KZC23304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.400
Your Current Organism:
Rhodanobacter thiooxydans
NCBI taxonomy Id: 416169
Other names: DSM 18863, KCTC 12771, R. thiooxydans, Rhodanobacter sp. FW104-T7, Rhodanobacter thiooxydans Lee et al. 2007, strain LCS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.