STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APL_0293Putative type I site-specific restriction-modification system, R (restriction) subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification. (1045 aa)    
Predicted Functional Partners:
APL_0290
Putative Type I restriction enzyme EcoR124II specificity protein.
 
  
 0.864
APL_1194
Type I restriction-modification system, M subunit.
 
 
 0.855
hsdM3
Putative type I modification enzyme.
 
 
 0.810
uupA
ABC transporter ATP-binding protein Uup-1.
       0.718
APL_0295
Hypothetical protein.
       0.718
APL_1193
Putative type I restriction-modification system, S subunit.
 
  
 0.647
hsdS3
Putative type I restriction system specificity protein.
 
  
 0.579
APL_0144
Predicted ATP-dependent endonuclease of the OLD family.
  
    0.508
APL_1195
Hypothetical protein.
  
    0.423
Your Current Organism:
Actinobacillus pleuropneumoniae
NCBI taxonomy Id: 416269
Other names: A. pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae L20, Actinobacillus pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae serovar 5b strain L20
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