nlpC protein (Actinobacillus pleuropneumoniae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

nlpC

Putative lipoprotein. (198 aa)

Predicted Functional Partners:

fstX

0.586

prc

0.546

nlpI

0.522

nfo

0.501

amiB

0.412

Your Current Organism:

Actinobacillus pleuropneumoniae

NCBI taxonomy Id: 416269
Other names: A. pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae L20, Actinobacillus pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae serovar 5b strain L20

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
amiB	fstX	APL_1136	APL_1344	Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor.	Cell division protein FtsX-like protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	0.681
amiB	nlpC	APL_1136	APL_0359	Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor.	Putative lipoprotein.	0.412
amiB	prc	APL_1136	APL_0120	Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor.	Tail-specific protease precursor; Belongs to the peptidase S41A family.	0.584
fstX	amiB	APL_1344	APL_1136	Cell division protein FtsX-like protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor.	0.681
fstX	nlpC	APL_1344	APL_0359	Cell division protein FtsX-like protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	Putative lipoprotein.	0.586
nfo	nlpC	APL_0358	APL_0359	Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.	Putative lipoprotein.	0.501
nlpC	amiB	APL_0359	APL_1136	Putative lipoprotein.	Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor.	0.412
nlpC	fstX	APL_0359	APL_1344	Putative lipoprotein.	Cell division protein FtsX-like protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.	0.586
nlpC	nfo	APL_0359	APL_0358	Putative lipoprotein.	Putative endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic (AP) sites, generating a 3'-hydroxyl group and a 5'-terminal sugar phosphate.	0.501
nlpC	nlpI	APL_0359	APL_0576	Putative lipoprotein.	Lipoprotein NlpI-like precursor; May be involved in cell division.	0.522
nlpC	prc	APL_0359	APL_0120	Putative lipoprotein.	Tail-specific protease precursor; Belongs to the peptidase S41A family.	0.546
nlpI	nlpC	APL_0576	APL_0359	Lipoprotein NlpI-like precursor; May be involved in cell division.	Putative lipoprotein.	0.522
nlpI	prc	APL_0576	APL_0120	Lipoprotein NlpI-like precursor; May be involved in cell division.	Tail-specific protease precursor; Belongs to the peptidase S41A family.	0.786
prc	amiB	APL_0120	APL_1136	Tail-specific protease precursor; Belongs to the peptidase S41A family.	Putative N-acetylmuramoyl-L-alanine amidase AmiB precursor.	0.584
prc	nlpC	APL_0120	APL_0359	Tail-specific protease precursor; Belongs to the peptidase S41A family.	Putative lipoprotein.	0.546
prc	nlpI	APL_0120	APL_0576	Tail-specific protease precursor; Belongs to the peptidase S41A family.	Lipoprotein NlpI-like precursor; May be involved in cell division.	0.786

Server load: low (28%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Textmining

Coexpression

Databases

Fusion

© STRING Consortium 2026

Credits

Access

Info

About