STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APL_0849Inner membrane ABC transporter permease. (317 aa)    
Predicted Functional Partners:
APL_0850
ABC transporter, ATP-binding/permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
APL_0851
ABC transporter, ATP-binding subunit.
 
 0.996
APL_0848
Putative ABC transporter periplasmic binding protein.
  0.991
APL_0027
Nickel transport system permease protein.
 
 0.987
APL_0026
ABC transporter ATP-binding protein.
 
 
 0.981
APL_0029
ABC transporter periplasmic protein.
 
  0.972
APL_1001
Putative binding protein.
 
 
 0.956
APL_0028
ABC transporter permease protein.
  
  
 
0.922
dppC
Dipeptide transport system permease protein DppC.
  
 0.911
dppD
Dipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily.
 
 
 0.886
Your Current Organism:
Actinobacillus pleuropneumoniae
NCBI taxonomy Id: 416269
Other names: A. pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae L20, Actinobacillus pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae serovar 5b strain L20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.