Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APL_0890 | fdhD | APL_0890 | APL_0891 | Hypothetical protein. | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.777 |
| APL_0898 | fdhD | APL_0898 | APL_0891 | Putative oxalate/formate antiporter. | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.440 |
| fdhD | APL_0890 | APL_0891 | APL_0890 | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Hypothetical protein. | 0.777 |
| fdhD | APL_0898 | APL_0891 | APL_0898 | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Putative oxalate/formate antiporter. | 0.440 |
| fdhD | fdhE | APL_0891 | APL_0896 | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | 0.441 |
| fdhD | fdxG | APL_0891 | APL_0892 | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Formate dehydrogenase, nitrate-inducible, major subunit. | 0.463 |
| fdhD | fdxG-2 | APL_0891 | APL_0893 | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Formate dehydrogenase, nitrate-inducible, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.436 |
| fdhD | iscS | APL_0891 | APL_0931 | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. | 0.456 |
| fdhD | moaA | APL_0891 | APL_0690 | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.608 |
| fdhD | moaC | APL_0891 | APL_0691 | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.464 |
| fdhD | moaE | APL_0891 | APL_0693 | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | Molybdopterin-converting factor subunit 2. | 0.436 |
| fdhD | mobAB | APL_0891 | APL_1866 | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | MobAB fusion protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family. | 0.652 |
| fdhE | fdhD | APL_0896 | APL_0891 | Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.441 |
| fdhE | fdxG | APL_0896 | APL_0892 | Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | Formate dehydrogenase, nitrate-inducible, major subunit. | 0.950 |
| fdhE | fdxG-2 | APL_0896 | APL_0893 | Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | Formate dehydrogenase, nitrate-inducible, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.963 |
| fdxG | fdhD | APL_0892 | APL_0891 | Formate dehydrogenase, nitrate-inducible, major subunit. | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.463 |
| fdxG | fdhE | APL_0892 | APL_0896 | Formate dehydrogenase, nitrate-inducible, major subunit. | Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | 0.950 |
| fdxG | fdxG-2 | APL_0892 | APL_0893 | Formate dehydrogenase, nitrate-inducible, major subunit. | Formate dehydrogenase, nitrate-inducible, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.999 |
| fdxG-2 | fdhD | APL_0893 | APL_0891 | Formate dehydrogenase, nitrate-inducible, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase accessory protein-like protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.436 |
| fdxG-2 | fdhE | APL_0893 | APL_0896 | Formate dehydrogenase, nitrate-inducible, major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Formate dehydrogenase accessory protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. | 0.963 |
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