Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
APL_0906Putative acetyltransferase. (191 aa)    
Predicted Functional Partners:
APL_1471
Putative sugar transferase.
  
  
 0.861
APL_0907
Hypothetical protein.
 
     0.788
APL_0905
Hypothetical protein.
 
     0.781
rfbD
Putative UDP-galactopyranose mutase.
  
    0.686
wecE
TDP-4-keto-6-deoxy-D-glucose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.630
cps5C
Region 2 capsular polysaccharide biosynthesis protein; Pubmed:9632602.
       0.513
birA
Bifunctional protein birA.
  
  
 0.484
APL_0908
Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.454
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 0.431
Your Current Organism:
Actinobacillus pleuropneumoniae
NCBI taxonomy Id: 416269
Other names: A. pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae L20, Actinobacillus pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae serovar 5b strain L20
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