STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APL_0907Hypothetical protein. (380 aa)    
Predicted Functional Partners:
APL_0905
Hypothetical protein.
 
    0.818
APL_0906
Putative acetyltransferase.
 
     0.791
APL_1581
Putative glycosyltransferase; Pubmed:9632602.
   
 
 0.665
APL_1634
Putative glycosyltransferase.
   
 
 0.665
APL_0908
Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
    0.652
fruK
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
    0.474
Your Current Organism:
Actinobacillus pleuropneumoniae
NCBI taxonomy Id: 416269
Other names: A. pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae L20, Actinobacillus pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae serovar 5b strain L20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.