STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APL_0968Hypothetical protein; Belongs to the UPF0231 family. (125 aa)    
Predicted Functional Partners:
APL_1553
Hypothetical protein.
  
     0.704
wecF
4-alpha-L-fucosyltransferase.
  
     0.685
APL_1867
Hypothetical protein.
  
     0.680
APL_0095
Hypothetical protein.
  
     0.660
ilvM
Acetolactate synthase isozyme II small subunit (AHAS-II).
  
     0.631
APL_1544
Putative ECA polymerase.
  
     0.615
APL_0038
Hypothetical protein.
  
     0.603
trpR
Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription.
  
     0.599
APL_1141
Hypothetical protein; Belongs to the UPF0267 family.
  
     0.586
APL_0724
Hypothetical protein.
  
     0.570
Your Current Organism:
Actinobacillus pleuropneumoniae
NCBI taxonomy Id: 416269
Other names: A. pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae L20, Actinobacillus pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae serovar 5b strain L20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.