Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APL_1748 | comM | APL_1748 | APL_1747 | Outer membrane lipoprotein A precursor. | Competence protein comM. | 0.497 |
| APL_1748 | mreB | APL_1748 | APL_0435 | Outer membrane lipoprotein A precursor. | Rod shape-determining protein MreB. | 0.679 |
| APL_1748 | pgsA | APL_1748 | APL_0275 | Outer membrane lipoprotein A precursor. | Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.564 |
| APL_1748 | rplV | APL_1748 | APL_1765 | Outer membrane lipoprotein A precursor. | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.538 |
| APL_1748 | rplW | APL_1748 | APL_1762 | Outer membrane lipoprotein A precursor. | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.538 |
| APL_1748 | rpmC | APL_1748 | APL_1768 | Outer membrane lipoprotein A precursor. | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.538 |
| APL_1748 | secA | APL_1748 | APL_0239 | Outer membrane lipoprotein A precursor. | Preprotein translocase secA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.547 |
| APL_1748 | tufB-2 | APL_1748 | APL_1512 | Outer membrane lipoprotein A precursor. | Elongation factor Tu. | 0.436 |
| APL_1748 | yfeA | APL_1748 | APL_0272 | Outer membrane lipoprotein A precursor. | Iron (chelated) ABC transporter, periplasmic-binding protein; Belongs to the bacterial solute-binding protein 9 family. | 0.459 |
| comM | APL_1748 | APL_1747 | APL_1748 | Competence protein comM. | Outer membrane lipoprotein A precursor. | 0.497 |
| mreB | APL_1748 | APL_0435 | APL_1748 | Rod shape-determining protein MreB. | Outer membrane lipoprotein A precursor. | 0.679 |
| pgsA | APL_1748 | APL_0275 | APL_1748 | Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Outer membrane lipoprotein A precursor. | 0.564 |
| rplV | APL_1748 | APL_1765 | APL_1748 | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | Outer membrane lipoprotein A precursor. | 0.538 |
| rplV | rplW | APL_1765 | APL_1762 | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.999 |
| rplV | rpmC | APL_1765 | APL_1768 | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.998 |
| rplV | secA | APL_1765 | APL_0239 | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | Preprotein translocase secA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family. | 0.680 |
| rplV | tufB-2 | APL_1765 | APL_1512 | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | Elongation factor Tu. | 0.881 |
| rplW | APL_1748 | APL_1762 | APL_1748 | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | Outer membrane lipoprotein A precursor. | 0.538 |
| rplW | rplV | APL_1762 | APL_1765 | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 50S ribosomal protein L22; This protein binds specifically to 23S rRNA; its binding is stimulated by other ribosomal proteins, e.g. L4, L17, and L20. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). | 0.999 |
| rplW | rpmC | APL_1762 | APL_1768 | 50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.997 |
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