torD protein (Actinobacillus pleuropneumoniae)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

torD

Chaperone protein TorD; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily. (199 aa)

Predicted Functional Partners:

torA

0.997

torC

0.994

torZ

0.980

torY

0.946

dmsA

0.824

nrfD

0.656

APL_1678

0.656

napG

0.600

napF

0.550

nrfB

0.531

Your Current Organism:

Actinobacillus pleuropneumoniae

NCBI taxonomy Id: 416269
Other names: A. pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae L20, Actinobacillus pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae serovar 5b strain L20

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APL_1678	dmsA	APL_1678	APL_1674	Putative ferredoxin.	Anaerobic dimethyl sulfoxide reductase chain A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	0.792
APL_1678	napF	APL_1678	APL_1431	Putative ferredoxin.	Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.	0.453
APL_1678	napG	APL_1678	APL_1428	Putative ferredoxin.	Ferredoxin-type protein napG-like protein.	0.536
APL_1678	nrfD	APL_1678	APL_0103	Putative ferredoxin.	Nitrite reductase transmembrane protein.	0.428
APL_1678	torA	APL_1678	APL_1798	Putative ferredoxin.	Trimethylamine-N-oxide reductase precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	0.597
APL_1678	torC	APL_1678	APL_1799	Putative ferredoxin.	Pentahemic c-type cytochrome.	0.760
APL_1678	torD	APL_1678	APL_1797	Putative ferredoxin.	Chaperone protein TorD; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.	0.656
APL_1678	torY	APL_1678	APL_0689	Putative ferredoxin.	Cytochrome c-type protein TorY; Belongs to the TorC/TorY family.	0.875
APL_1678	torZ	APL_1678	APL_0688	Putative ferredoxin.	trimethylamine-N-oxide reductase precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	0.554
dmsA	APL_1678	APL_1674	APL_1678	Anaerobic dimethyl sulfoxide reductase chain A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Putative ferredoxin.	0.792
dmsA	napG	APL_1674	APL_1428	Anaerobic dimethyl sulfoxide reductase chain A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Ferredoxin-type protein napG-like protein.	0.713
dmsA	nrfD	APL_1674	APL_0103	Anaerobic dimethyl sulfoxide reductase chain A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Nitrite reductase transmembrane protein.	0.468
dmsA	torC	APL_1674	APL_1799	Anaerobic dimethyl sulfoxide reductase chain A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Pentahemic c-type cytochrome.	0.514
dmsA	torD	APL_1674	APL_1797	Anaerobic dimethyl sulfoxide reductase chain A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Chaperone protein TorD; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.	0.824
dmsA	torY	APL_1674	APL_0689	Anaerobic dimethyl sulfoxide reductase chain A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	Cytochrome c-type protein TorY; Belongs to the TorC/TorY family.	0.470
dmsA	torZ	APL_1674	APL_0688	Anaerobic dimethyl sulfoxide reductase chain A precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	trimethylamine-N-oxide reductase precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.	0.404
napF	APL_1678	APL_1431	APL_1678	Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.	Putative ferredoxin.	0.453
napF	napG	APL_1431	APL_1428	Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.	Ferredoxin-type protein napG-like protein.	0.886
napF	torC	APL_1431	APL_1799	Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.	Pentahemic c-type cytochrome.	0.626
napF	torD	APL_1431	APL_1797	Ferredoxin-type protein NapF; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.	Chaperone protein TorD; Involved in the biogenesis of TorA. Acts on TorA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Belongs to the TorD/DmsD family. TorD subfamily.	0.550

page 1 of 5

Server load: low (16%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About