STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APL_2002Hypothetical protein. (489 aa)    
Predicted Functional Partners:
APL_0041
Hypothetical protein.
  
     0.772
tbpA-2
Transferrin-binding protein 1 Tbp1.
  
     0.752
APL_0936
Hypothetical protein.
  
     0.735
apxIC
RTX-I toxin-activating lysine-acyltransferase ApxIC; Pubmed:8359891.
  
     0.721
APL_0363
Hypothetical protein.
  
     0.719
APL_1159
Hypothetical protein.
  
     0.718
APL_0453
Hypothetical protein.
  
     0.713
APL_0246
Truncated transferrin-binding protein 1 precursor.
  
     0.702
apxIIA
RTX-II toxin determinant A.
  
     0.688
apxIA
RTX-I toxin determinant A; Pubmed:8359891.
  
     0.676
Your Current Organism:
Actinobacillus pleuropneumoniae
NCBI taxonomy Id: 416269
Other names: A. pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae L20, Actinobacillus pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae serovar 5b strain L20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.