STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
aldAPutative aldehyde dehydrogenase aldA; Belongs to the aldehyde dehydrogenase family. (493 aa)    
Predicted Functional Partners:
adh2
Aldehyde-alcohol dehydrogenase 2; Includes: Alcohol dehydrogenase; Acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.923
adhI
Alcohol dehydrogenase 1.
  
 0.923
adhC
Putative alcohol dehydrogenase class 3; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 0.921
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
    
 0.918
APL_1197
3-hydroxyacid dehydrogenase.
  
 
 0.917
acyP
Putative acylphosphatase.
    
 0.903
glxK
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
   
 
 0.902
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.891
gdhA
NADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.864
fadJ
Putative fatty acid oxidation complex alpha subunit; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.858
Your Current Organism:
Actinobacillus pleuropneumoniae
NCBI taxonomy Id: 416269
Other names: A. pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae L20, Actinobacillus pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae serovar 5b strain L20
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