STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fhuCFerrichrome transport ATP-binding protein fhuC. (226 aa)    
Predicted Functional Partners:
fhuB
Ferrichrome uptake protein fhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.997
APL_2014
ABC-type Fe3+-hydroxamate transport system, periplasmic component; Similar to Haemophilus parasuis FhuD.
 
 0.996
APL_1792
Fe(III) dicitrate ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.937
APL_1791
Putative periplasmic iron/siderophore binding protein.
 
 
 0.791
APL_2016
Ferrioxamine B receptor precursor.
 
  
 0.781
APL_1795
Putative periplasmic iron/siderophore binding protein.
 
 
 0.766
APL_0715
ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.756
APL_0716
iron(III) ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
  
 0.649
APL_0714
ABC transport system periplasmic protein.
 
  
 0.497
Your Current Organism:
Actinobacillus pleuropneumoniae
NCBI taxonomy Id: 416269
Other names: A. pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae L20, Actinobacillus pleuropneumoniae serovar 5b str. L20, Actinobacillus pleuropneumoniae serovar 5b strain L20
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