STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6Q6B2Uncharacterized protein. (294 aa)    
Predicted Functional Partners:
A0A1V6QKB7
Uncharacterized protein.
  
     0.534
A0A1V6QDF4
Uncharacterized protein.
  
     0.502
A0A1V6PTY5
F-box domain-containing protein.
  
     0.490
A0A1V6QDG2
Uncharacterized protein.
  
     0.469
A0A1V6Q042
Uncharacterized protein.
  
     0.466
MED20
Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
  
     0.435
A0A1V6PRL4
Uncharacterized protein.
  
     0.427
A0A1V6Q9L1
Uncharacterized protein.
  
     0.422
A0A1V6PRB8
Uncharacterized protein.
  
     0.421
A0A1V6QKX8
Uncharacterized protein.
  
     0.418
Your Current Organism:
Penicillium antarcticum
NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum
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