STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6Q8P8Uncharacterized protein. (382 aa)    
Predicted Functional Partners:
A0A1V6QFL3
BZIP domain-containing protein.
   
 0.779
A0A1V6Q5Q9
Uncharacterized protein.
    
 0.639
A0A1V6PXF3
DHR10 domain-containing protein.
    
 0.634
A0A1V6QNQ6
Uncharacterized protein.
    
 0.622
A0A1V6QA95
Uncharacterized protein.
    
  0.608
A0A1V6PUR8
Uncharacterized protein.
    
 0.576
A0A1V6Q9L9
Uncharacterized protein.
    
 
 0.554
A0A1V6Q6E2
Uncharacterized protein.
    
  0.534
A0A1V6Q1E9
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.529
A0A1V6QCP7
Hist_deacetyl domain-containing protein.
    
 0.520
Your Current Organism:
Penicillium antarcticum
NCBI taxonomy Id: 416450
Other names: CBS 100492, FRR 4989, P. antarcticum
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