Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tlet_0010PFAM: glycosyl transferase group 1; KEGG: efa:EF2891 glycosyl transferase, group 1 family protein. (336 aa)    
Predicted Functional Partners:
Tlet_0508
PFAM: glycosyl transferase group 1; KEGG: tma:TM0744 hypothetical protein.
  
  
 
0.928
Tlet_0042
PFAM: sulfatase; KEGG: tma:TM1703 hypothetical protein.
    
 0.906
Tlet_0009
KEGG: cac:CAC3016 uncharacterized conserved membrane protein.
 
    0.840
Tlet_1890
PFAM: glycosyl transferase group 1; KEGG: dsy:DSY3337 hypothetical protein.
  
     0.654
Tlet_0008
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tma:TM1695 hypothetical protein.
  
   0.642
Tlet_0007
PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: tma:TM1696 leader peptidase (prepilin peptidase) / N-methyltransferase.
     
 0.580
Tlet_0303
TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: tma:TM0862 glucose-1-phosphate thymidylyltransferase.
 
  
 0.570
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
  
    0.482
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.482
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: tma:TM0378 glycerol-3-phosphate dehydrogenase.
  
  
 0.468
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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