STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0033PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tte:TTE0800 ABC-type sugar transport systems, permease components. (288 aa)    
Predicted Functional Partners:
Tlet_0034
PFAM: extracellular solute-binding protein family 1; KEGG: lwe:lwe1747 ABC transporter, substrate-binding protein.
  0.980
Tlet_0032
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3440 sugar ABC transporter permease.
   0.965
Tlet_1546
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_2094 binding-protein-dependent transport systems inner membrane component.
   0.853
Tlet_1153
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lmo:lmo0767 similar to ABC transporter, permease protein.
   0.849
Tlet_1673
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1924 sugar ABC transporter, permease protein.
 
   0.849
Tlet_2035
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3123 sugar ABC transporter permease.
   0.848
Tlet_0107
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0812 multiple sugar transport system permease protein.
   0.847
Tlet_0215
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0219 similar to sugar ABC transporter, permease protein.
   0.847
Tlet_0116
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3280 sugar ABC transporter permease.
   0.845
Tlet_1145
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component.
 
   0.845
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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