STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0117Alpha-mannosidase; PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; Glycoside hydrolase family 38 central region; KEGG: tma:TM1851 alpha-mannosidase. (1020 aa)    
Predicted Functional Partners:
Tlet_0085
PFAM: glycoside hydrolase family 38; KEGG: tma:TM1231 alpha-mannosidase-related protein.
  
  
 
0.929
Tlet_0116
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3280 sugar ABC transporter permease.
       0.725
Tlet_0115
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3281 sugar ABC transporter permease.
       0.691
Tlet_0114
PFAM: extracellular solute-binding protein family 1; KEGG: bcl:ABC3282 sugar ABC transporter substrate-binding protein.
 
     0.661
Tlet_0629
PFAM: response regulator receiver; KEGG: tma:TM0700 chemotaxis response regulator CheY.
  
    0.548
Tlet_1136
PFAM: extracellular solute-binding protein family 1; KEGG: tma:TM0432 multiple sugar transport system substrate-binding protein.
 
     0.488
Tlet_1295
KEGG: sme:SMb20968 hypothetical protein.
  
    0.479
Tlet_1132
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: tma:TM0425 oxidoreductase, putative.
  
    0.465
Tlet_1291
PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20971 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
 
     0.465
Tlet_1131
PFAM: glycoside hydrolase family 4; KEGG: tma:TM1068 alpha-glucosidase, putative.
 
  
 0.456
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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