Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tlet_0133PFAM: extracellular solute-binding protein family 1; KEGG: lmo:lmo0768 similar to sugar ABC transporter, periplasmic sugar-binding protein. (421 aa)    
Predicted Functional Partners:
Tlet_0132
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: syn:slr1202 putative ABC-type lactose transport system permease protein.
 
   0.940
Tlet_0131
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB3422 sugar binding-protein dependent transporter system permease.
 
   0.924
Tlet_0086
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tma:TM1232 multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  0.742
Tlet_1280
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tma:TM1276 putative multiple sugar transport system ATP-binding protein.
  
  0.742
Tlet_2033
PFAM: extracellular solute-binding protein family 1; KEGG: tde:TDE1283 extracellular solute-binding lipoprotein, putative.
  
     0.680
Tlet_1143
PFAM: extracellular solute-binding protein family 1; KEGG: lxx:Lxx23570 ABC transporter, sugar binding protein.
  
     0.677
Tlet_1578
PFAM: extracellular solute-binding protein family 1; KEGG: rle:pRL90126 putative solute binding-protein component of transporter.
  
  
 
0.673
Tlet_0911
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1203 maltose transport system permease protein.
   
  0.666
Tlet_0034
PFAM: extracellular solute-binding protein family 1; KEGG: lwe:lwe1747 ABC transporter, substrate-binding protein.
  
  
 
0.665
Tlet_1805
PFAM: extracellular solute-binding protein family 1; KEGG: sma:SAV2143 ABC transporter solute-binding protein.
  
  
 
0.664
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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