STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0201PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fnu:FN0397 dipeptide transport system permease protein dppB. (305 aa)    
Predicted Functional Partners:
Tlet_0200
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2452 binding-protein-dependent transport systems inner membrane component.
    0.965
Tlet_0202
4-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: ttj:TTHA1336 peptide ABC transporter oligopeptide-binding protein.
   0.945
Tlet_1505
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_1130 oligopeptide/dipeptide ABC transporter, permease protein.
    0.859
Tlet_0073
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0566 oligopeptide ABC transporter permease.
    0.858
Tlet_0198
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: smr:Smar_0342 oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
  
 0.850
Tlet_1932
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1153 putative oligopeptide transport system permease protein.
    0.847
Tlet_0199
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    0.837
Tlet_1686
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bat:BAS4391 oligopeptide ABC transporter, oligopeptide-binding protein.
    0.834
Tlet_0071
PFAM: extracellular solute-binding protein family 5; KEGG: bcl:ABC0564 oligopeptide ABC transporter substrate-binding protein.
   0.803
Tlet_1308
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_0874 binding-protein-dependent transport systems inner membrane component.
    0.781
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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