Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tlet_0216PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV2362 putative sugar transporter. (298 aa)    
Predicted Functional Partners:
Tlet_0215
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lin:lin0219 similar to sugar ABC transporter, permease protein.
 
   0.961
Tlet_0217
PFAM: extracellular solute-binding protein family 1; KEGG: sma:SAV2361 ABC transporter sugar-binding protein.
 
   0.859
Tlet_1546
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_2094 binding-protein-dependent transport systems inner membrane component.
 
   0.840
Tlet_2035
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3123 sugar ABC transporter permease.
   0.840
Tlet_0107
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0812 multiple sugar transport system permease protein.
   0.839
Tlet_1153
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lmo:lmo0767 similar to ABC transporter, permease protein.
 
   0.839
Tlet_0032
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3440 sugar ABC transporter permease.
 
   0.837
Tlet_0116
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC3280 sugar ABC transporter permease.
 
   0.837
Tlet_1293
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0318 sugar ABC transporter permease.
 
   0.836
Tlet_1145
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component.
 
   0.835
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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