STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0224PFAM: protein of unknown function DUF6 transmembrane; KEGG: tma:TM0586 hypothetical protein. (290 aa)    
Predicted Functional Partners:
Tlet_0225
PFAM: thioesterase superfamily protein; KEGG: tte:TTE0718 acyl-CoA hydrolase.
     
 0.780
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
    0.780
Tlet_0226
PFAM: protein of unknown function DUF849; KEGG: fnu:FN1868 hypothetical cytosolic protein.
       0.773
Tlet_1337
PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: chy:CHY_1867 hypothetical protein.
  
     0.712
Tlet_0223
PFAM: protein of unknown function DUF342; KEGG: csc:Csac_1286 protein of unknown function DUF342.
       0.539
Tlet_0772
PFAM: protein of unknown function DUF554; KEGG: tma:TM0226 hypothetical protein.
  
     0.410
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.