STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0296PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1256 ABC transporter, ATP-binding protein. (575 aa)    
Predicted Functional Partners:
Tlet_0982
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0043 ABC transporter, ATP-binding protein.
 
  
 
0.937
Tlet_1342
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: cpe:CPE1270 probable ABC transporter; Belongs to the ABC transporter superfamily.
 
 
   
0.901
Tlet_0086
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tma:TM1232 multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
   
0.899
Tlet_0198
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: smr:Smar_0342 oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
     
0.873
Tlet_0644
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tma:TM0530 putative oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.868
Tlet_1280
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tma:TM1276 putative multiple sugar transport system ATP-binding protein.
 
 
   
0.828
Tlet_0297
PFAM: aminotransferase class I and II; KEGG: tma:TM1255 aspartate aminotransferase.
  
    0.811
Tlet_0294
PFAM: methyltransferase small; KEGG: tma:TM0691 hypothetical protein.
       0.786
Tlet_0295
Hypothetical protein.
       0.786
Tlet_1212
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC1558 ABC-type transport system,membrane ATPase component.
 
    
0.757
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.