Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tlet_0337PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC0703 sugar ABC-transporter, ATP-ase component. (501 aa)    
Predicted Functional Partners:
Tlet_0338
PFAM: inner-membrane translocator; KEGG: csc:Csac_2322 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.981
Tlet_0339
PFAM: inner-membrane translocator; KEGG: csc:Csac_2321 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.981
Tlet_0336
PFAM: basic membrane lipoprotein; KEGG: tde:TDE0951 lipoprotein, putative.
 
 
 0.977
Tlet_1046
PFAM: inner-membrane translocator; KEGG: tma:TM0104 simple sugar transport system permease protein.
  
 0.840
Tlet_1047
PFAM: inner-membrane translocator; KEGG: tma:TM0105 simple sugar transport system permease protein.
 
  
 0.839
Tlet_1021
PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0008 hypothetical ABC transporter, permease protein.
 
  
 0.814
Tlet_1022
PFAM: inner-membrane translocator; KEGG: tte:TTE0460 uncharacterized ABC-type transport system, permease component.
 
  
 0.801
Tlet_0678
PFAM: inner-membrane translocator; KEGG: sme:SMb20126 putative sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.778
Tlet_0679
PFAM: inner-membrane translocator; KEGG: tte:TTE0460 uncharacterized ABC-type transport system, permease component.
 
  
 0.770
Tlet_1044
PFAM: basic membrane lipoprotein; KEGG: tma:TM0102 putative simple sugar transport system substrate-binding protein.
 
  
 0.622
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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