STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0352PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0073 putative oligopeptide transport system permease protein. (284 aa)    
Predicted Functional Partners:
Tlet_0353
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tma:TM0074 putative oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
    0.970
Tlet_0354
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tma:TM0075 putative oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
    0.967
Tlet_0351
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0072 putative oligopeptide transport system permease protein.
    0.963
Tlet_0350
PFAM: extracellular solute-binding protein family 5; KEGG: tma:TM0071 putative oligopeptide transport system substrate-binding protein.
 
   0.923
Tlet_0356
PFAM: Acetyl xylan esterase; KEGG: tma:TM0077 acetylxylan esterase.
 
     0.826
Tlet_2025
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_0399 binding-protein-dependent transport systems inner membrane component.
    0.819
Tlet_1439
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1222 putative oligopeptide transport system permease protein.
    0.818
Tlet_0355
PFAM: glycoside hydrolase family 3 domain protein; KEGG: tma:TM0076 beta-glucosidase.
       0.782
Tlet_2023
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: vvy:VVA0135 peptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
    0.735
Tlet_2026
PFAM: extracellular solute-binding protein family 5; KEGG: mxa:MXAN_6551 putative oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein.
 
   0.735
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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