STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0404PFAM: extracellular solute-binding protein family 1; KEGG: rxy:Rxyl_0621 extracellular solute-binding protein, family 1. (412 aa)    
Predicted Functional Partners:
Tlet_0405
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_0622 binding-protein-dependent transport systems inner membrane component.
 
  0.985
Tlet_0406
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_0623 binding-protein-dependent transport systems inner membrane component.
 
  0.970
Tlet_0086
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tma:TM1232 multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 0.884
Tlet_1280
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tma:TM1276 putative multiple sugar transport system ATP-binding protein.
  
 0.884
Tlet_1844
PFAM: extracellular solute-binding protein family 1; KEGG: pho:PH1039 multiple sugar transport system substrate-binding protein.
  
     0.745
Tlet_0407
PFAM: uncharacterised conserved protein UCP016719; KEGG: gtn:GTNG_1290 hypothetical protein.
 
     0.709
Tlet_1109
PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll0854 putative multiple sugar transport system substrate-binding protein.
  
     0.687
Tlet_1040
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gka:GK3205 ABC transporter (permease).
  
   0.638
Tlet_1032
PFAM: extracellular solute-binding protein family 1; KEGG: tma:TM1855 multiple sugar transport system substrate-binding protein.
  
     0.618
Tlet_1805
PFAM: extracellular solute-binding protein family 1; KEGG: sma:SAV2143 ABC transporter solute-binding protein.
  
     0.606
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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