STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0483TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gsu:GSU2650 amino acid ABC transporter, permease protein, putative. (239 aa)    
Predicted Functional Partners:
Tlet_0484
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF0680 glutamine transport system ATP-binding protein.
 0.999
Tlet_0860
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: hbu:Hbut_0685 glutamine-binding periplasmic protein precursor.
 
 0.984
Tlet_0021
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_0239 ABC transporter related.
 
 0.981
Tlet_0482
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: aha:AHA_2800 amino acid ABC transporter, periplasmic amino acid-binding protein.
 
 0.979
Tlet_0862
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_3901 ABC transporter related.
 
 0.977
Tlet_0020
PFAM: extracellular solute-binding protein family 3; KEGG: sfu:Sfum_0814 extracellular solute-binding protein, family 3.
 
 0.924
Tlet_0861
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2547 polar amino acid ABC transporter, inner membrane subunit.
 
  
 
0.515
Tlet_0863
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hbu:Hbut_0688 glutamine transport system permease protein GlnP.
  
  
 
0.504
Tlet_1471
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1054 ABC transporter, ATP-binding protein.
 
   
 0.491
Tlet_0023
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BG11488 glutamine transport system permease protein.
  
  
 
0.490
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.