STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0484PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF0680 glutamine transport system ATP-binding protein. (243 aa)    
Predicted Functional Partners:
Tlet_0483
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gsu:GSU2650 amino acid ABC transporter, permease protein, putative.
 0.998
Tlet_0863
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hbu:Hbut_0688 glutamine transport system permease protein GlnP.
 
 0.983
Tlet_0022
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dps:DP1560 probable amino acid ABC transporter, permease protein.
 
 0.953
Tlet_0482
PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: aha:AHA_2800 amino acid ABC transporter, periplasmic amino acid-binding protein.
 
 
 0.933
Tlet_0861
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dvl:Dvul_2547 polar amino acid ABC transporter, inner membrane subunit.
 
 0.908
Tlet_0023
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bsu:BG11488 glutamine transport system permease protein.
 
 
 0.900
Tlet_0807
PFAM: protein of unknown function DUF214; KEGG: tma:TM0351 conserved hypothetical protein.
 
 
    0.900
Tlet_1608
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH2015 ABC transporter ATP-binding protein.
 
     
0.899
Tlet_1217
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1319 ABC transporter, ATP-binding protein.
 
     
0.898
Tlet_0211
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0288 ABC transporter, ATP-binding protein.
 
     
0.894
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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