STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0514KEGG: tma:TM0749 hypothetical protein. (153 aa)    
Predicted Functional Partners:
Tlet_0515
KEGG: tma:TM0750 hypothetical protein.
       0.800
Tlet_0516
PFAM: phosphoribulokinase/uridine kinase; KEGG: tma:TM0751 uridine kinase.
       0.800
Tlet_0508
PFAM: glycosyl transferase group 1; KEGG: tma:TM0744 hypothetical protein.
       0.795
Tlet_0507
KEGG: tma:TM0743 hypothetical protein.
       0.787
Tlet_0512
TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41; KEGG: tma:TM0747 carboxyl-terminal protease; Belongs to the peptidase S41A family.
       0.787
Tlet_0513
tRNA (adenine-N(1)-)-methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
       0.787
Tlet_0506
TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: tma:TM0224 biotin--(acetyl-CoA carboxylase) synthetase.
       0.773
Tlet_0509
Exporter of the RND superfamily protein-like protein; KEGG: gme:Gmet_2819 putative rRNA methylase.
       0.773
Tlet_0510
Hypothetical protein.
       0.773
Tlet_0511
Hypothetical protein.
       0.773
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.