Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tlet_0650PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0503 putative oligopeptide transport system permease protein. (345 aa)    
Predicted Functional Partners:
Tlet_0649
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0502 putative oligopeptide transport system permease protein.
 
   0.972
Tlet_0641
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0533 putative oligopeptide transport system permease protein.
 
   0.914
Tlet_0647
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tma:TM0500 putative oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.862
Tlet_0648
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tma:TM0501 putative oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
   0.854
Tlet_0643
PFAM: extracellular solute-binding protein family 5; KEGG: tma:TM0531 putative oligopeptide transport system substrate-binding protein.
 
   0.844
Tlet_1505
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: chy:CHY_1130 oligopeptide/dipeptide ABC transporter, permease protein.
 
   0.837
Tlet_0073
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0566 oligopeptide ABC transporter permease.
 
   0.823
Tlet_1686
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bat:BAS4391 oligopeptide ABC transporter, oligopeptide-binding protein.
 
   0.822
Tlet_1716
PFAM: extracellular solute-binding protein family 5; KEGG: tma:TM0460 putative oligopeptide transport system substrate-binding protein.
 
   0.822
Tlet_0645
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tma:TM0498 putative oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
   0.818
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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