STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0652KEGG: tma:TM1584 comFC protein, putative. (203 aa)    
Predicted Functional Partners:
Tlet_0292
TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: tma:TM0250 DNA processing chain A.
 
 
 0.817
Tlet_0969
TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; KEGG: tma:TM0513 ComM protein.
 
  
 0.780
Tlet_0651
PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: tma:TM0429 methyl-accepting chemotaxis protein.
       0.746
Tlet_0080
TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: tma:TM1365 flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.745
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.721
Tlet_0650
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0503 putative oligopeptide transport system permease protein.
       0.716
Tlet_0649
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0502 putative oligopeptide transport system permease protein.
       0.701
Tlet_0644
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tma:TM0530 putative oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.692
Tlet_0645
TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: tma:TM0498 putative oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.692
Tlet_0646
Hypothetical protein.
       0.692
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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