STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0680PFAM: ADP-ribosylation/Crystallin J1; KEGG: sma:SAV1919 hypothetical protein. (462 aa)    
Predicted Functional Partners:
Tlet_0678
PFAM: inner-membrane translocator; KEGG: sme:SMb20126 putative sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
     0.844
Tlet_0676
PFAM: basic membrane lipoprotein; KEGG: bmb:BruAb2_0010 lipoprotein, Bmp family.
 
     0.839
Tlet_0679
PFAM: inner-membrane translocator; KEGG: tte:TTE0460 uncharacterized ABC-type transport system, permease component.
 
     0.838
Tlet_0677
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tko:TK0658 ABC-type transport system, ATPase component.
       0.791
Tlet_0675
PFAM: cobalt transport protein; KEGG: tma:TM1868 putative cobalt transport system permease protein.
       0.689
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
     
 0.568
Tlet_0019
PFAM: L-fucose isomerase domain protein; L-fucose isomerase _1 domain protein; L-fucose isomerase _2 domain protein; KEGG: tma:TM0307 L-fucose isomerase, putative.
  
     0.560
Tlet_0110
KEGG: bcl:ABC3582 hypothetical protein.
  
   
 0.548
Tlet_0105
KEGG: tte:TTE2409 hypothetical protein.
  
     0.510
Tlet_0673
Hypothetical protein.
       0.500
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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