STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0706PFAM: cobalamin B12-binding domain protein; KEGG: tko:TK0328 methylmalonyl-CoA mutase, C-terminus of large subunit. (136 aa)    
Predicted Functional Partners:
Tlet_0705
TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; KEGG: tte:TTE1217 Methylmalonyl-CoA mutase, N-terminal domain/subunit.
 0.999
Tlet_0178
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: afu:AF2218 hypothetical protein.
  
 0.997
Tlet_0707
TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: pfu:PF1947 hypothetical protein.
  
 0.994
Tlet_1462
PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: hbu:Hbut_0202 succinyl-CoA synthetase alpha chain.
    
 0.927
Tlet_1461
Succinate--CoA ligase (ADP-forming); PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein; KEGG: mja:MJ0210 succinyl-CoA synthetase beta chain.
  
 
 0.923
Tlet_0570
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: tma:TM1164 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
    
 0.885
Tlet_1777
TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: tma:TM0015 pyruvate ferredoxin oxidoreductase, gamma subunit.
     
 0.818
Tlet_0569
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: pfu:PF0753 2-oxoglutarate ferredoxin oxidoreductase, beta subunit.
     
 0.816
Tlet_0750
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: tma:TM0405 2-oxoglutarate ferredoxin oxidoreductase, beta subunit.
     
 0.816
Tlet_1759
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: swo:Swol_1399 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit.
     
 0.816
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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