Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tlet_0799PFAM: Extracellular ligand-binding receptor; KEGG: tma:TM1135 branched-chain amino acid transport system substrate-binding protein. (375 aa)    
Predicted Functional Partners:
Tlet_0801
PFAM: inner-membrane translocator; KEGG: tma:TM1137 branched-chain amino acid transport system permease protein.
 
  
 0.967
Tlet_0800
PFAM: inner-membrane translocator; KEGG: tma:TM1136 branched-chain amino acid transport system permease protein.
 
  
 0.958
Tlet_0802
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1138 branched-chain amino acid transport system ATP-binding protein.
 
  
 0.952
Tlet_0803
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1139 branched-chain amino acid transport system ATP-binding protein.
 
  
 0.932
Tlet_1939
PFAM: inner-membrane translocator; KEGG: bqu:BQ06310 high-affinity branched-chain amino acid transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.898
Tlet_1940
PFAM: inner-membrane translocator; KEGG: sfu:Sfum_0861 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.872
Tlet_1938
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1138 branched-chain amino acid transport system ATP-binding protein.
 
  
 0.853
Tlet_1937
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1139 branched-chain amino acid transport system ATP-binding protein.
 
  
 0.803
Tlet_1074
Inner-membrane translocator; PFAM: alpha/beta hydrolase fold domain-containing protein; inner-membrane translocator; KEGG: det:DET0944 high-affinity branched-chain amino acid ABC transporter, permease protein, putative; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.780
Tlet_1121
PFAM: inner-membrane translocator; KEGG: rpc:RPC_1663 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.740
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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