STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0801PFAM: inner-membrane translocator; KEGG: tma:TM1137 branched-chain amino acid transport system permease protein. (353 aa)    
Predicted Functional Partners:
Tlet_0800
PFAM: inner-membrane translocator; KEGG: tma:TM1136 branched-chain amino acid transport system permease protein.
 
0.999
Tlet_0802
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1138 branched-chain amino acid transport system ATP-binding protein.
 
 0.999
Tlet_0803
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1139 branched-chain amino acid transport system ATP-binding protein.
 
 0.999
Tlet_1071
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH800 branched-chain amino acid ABC transporter ATP-binding protein.
 
 0.997
Tlet_1937
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1139 branched-chain amino acid transport system ATP-binding protein.
 
 0.997
Tlet_1938
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM1138 branched-chain amino acid transport system ATP-binding protein.
 
 0.997
Tlet_1940
PFAM: inner-membrane translocator; KEGG: sfu:Sfum_0861 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
Tlet_1123
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ttj:TTHA1335 branched-chain amino acid ABC transporter, ATP-binding protein.
 
 0.996
Tlet_1120
PFAM: inner-membrane translocator; KEGG: pub:SAR11_0656 branched-chain amino acid transport protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
Tlet_1122
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU2008 branched-chain amino acid ABC transporter, ATP-binding protein.
 
 0.995
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.