STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0849KEGG: cpe:CPE1656 hypothetical protein. (572 aa)    
Predicted Functional Partners:
Tlet_0847
TIGRFAM: metal dependent phophohydrolase; PFAM: extracellular solute-binding protein family 3; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: tma:TM1170 ABC transporter, periplasmic substrate-binding protein/conserved hypothetical protein.
  
  
 0.516
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.468
Tlet_0848
Hypothetical protein.
       0.463
Tlet_2020
PFAM: regulatory protein MarR; KEGG: gme:Gmet_2889 hypothetical protein.
  
   
 0.456
Tlet_0151
KEGG: mxa:MXAN_2958 hypothetical protein.
 
    0.416
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.