STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0864Hypothetical protein. (149 aa)    
Predicted Functional Partners:
Tlet_0865
PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: pae:PA2994 Na+-translocating NADH:quinone oxidoreductase, subunit Nqr6.
       0.809
Tlet_0867
PFAM: RnfA-Nqr electron transport subunit; KEGG: ilo:IL1047 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD; Belongs to the NqrDE/RnfAE family.
       0.798
Tlet_0868
PFAM: FMN-binding domain protein; KEGG: gfo:orf398 Na-translocating NADH-quinone reductase subunit C.
       0.798
rnfA-2
RnfA-Nqr electron transport subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.
       0.787
Tlet_0869
PFAM: NQR2 and RnfD family protein; KEGG: sat:SYN_01663 sodium-translocating NADH-quinone reductase subunit B.
       0.757
Tlet_0870
PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: tma:TM1878 UDP-sugar hydrolase; Belongs to the 5'-nucleotidase family.
       0.507
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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