Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Tlet_0907KEGG: tma:TM0945 hypothetical protein. (410 aa)    
Predicted Functional Partners:
Tlet_0908
TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: bca:BCE_0308 aspartate racemase.
       0.752
Tlet_0909
PFAM: acriflavin resistance protein; KEGG: tma:TM0372 cation efflux system protein, putative.
       0.736
Tlet_0906
Hypothetical protein.
       0.623
Tlet_0903
KEGG: neu:NE1602 bacterial general secretion pathway protein G.
 
     0.516
Tlet_1755
PFAM: alpha-2-macroglobulin; alpha-2-macroglobulin domain protein; KEGG: tma:TM0984 hypothetical protein.
  
     0.509
Tlet_0055
KEGG: tma:TM1046 hypothetical protein.
  
     0.499
Tlet_1865
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: gka:GK1892 myo-inositol catabolism protein.
  
     0.499
Tlet_0905
PFAM: polysaccharide deacetylase; KEGG: cff:CFF8240_1782 polysaccharide deacetylase.
       0.457
Tlet_0904
Uncharacterized FlgJ-related protein-like protein; KEGG: pub:SAR11_0379 Bax protein (hydrolyses peptidoglycan).
       0.431
Tlet_0910
PFAM: extracellular solute-binding protein family 1; KEGG: tma:TM1204 maltose transport system substrate-binding protein.
       0.430
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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