Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tlet_0914PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: tma:TM1200 transcriptional regulator, LacI family. (335 aa)    
Predicted Functional Partners:
Tlet_0913
Arabinogalactan endo-1,4-beta-galactosidase; PFAM: Ig domain protein; glycosyl hydrolase 53 domain protein; KEGG: tma:TM1201 arabinogalactan endo-1,4-beta-galactosidase, putative.
       0.773
Tlet_0912
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1202 maltose transport system permease protein.
  
  
 0.772
Tlet_0911
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1203 maltose transport system permease protein.
       0.752
Tlet_0915
PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: tma:TM1193 beta-galactosidase.
     
 0.745
Tlet_0910
PFAM: extracellular solute-binding protein family 1; KEGG: tma:TM1204 maltose transport system substrate-binding protein.
  
  
 0.639
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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