STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0945Hypothetical protein. (446 aa)    
Predicted Functional Partners:
Tlet_0946
PFAM: protein of unknown function DUF58; KEGG: tma:TM1133 hypothetical protein.
       0.800
Tlet_0947
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: tma:TM1132 moxR protein, putative.
       0.800
Tlet_0948
KEGG: tte:TTE1910 hypothetical protein.
       0.790
Tlet_0949
PFAM: YhhN family protein; KEGG: vch:VCA0703 hypothetical protein.
       0.479
Tlet_0942
Acylaminoacyl-peptidase; PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: tte:TTE1551 dipeptidyl aminopeptidase/acylaminoacyl-peptidase.
       0.423
Tlet_0943
Hypothetical protein; KEGG: mhu:Mhun_0418 PKD.
       0.423
Tlet_0944
TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: ava:Ava_B0165 ornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.423
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.