STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_0946PFAM: protein of unknown function DUF58; KEGG: tma:TM1133 hypothetical protein. (426 aa)    
Predicted Functional Partners:
Tlet_0947
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: tma:TM1132 moxR protein, putative.
 
  
 0.907
Tlet_0945
Hypothetical protein.
       0.800
Tlet_0948
KEGG: tte:TTE1910 hypothetical protein.
       0.791
Tlet_0154
PFAM: beta-lactamase domain protein; KEGG: tma:TM0894 hypothetical protein.
 
  
 0.746
Tlet_0151
KEGG: mxa:MXAN_2958 hypothetical protein.
 
  
 0.695
Tlet_1816
PFAM: ATPase; KEGG: pab:PAB1597 hypothetical protein.
  
     0.684
Tlet_1041
PFAM: ABC-2 type transporter; KEGG: rxy:Rxyl_0406 ABC-2 type transporter.
  
     0.667
Tlet_0404
PFAM: extracellular solute-binding protein family 1; KEGG: rxy:Rxyl_0621 extracellular solute-binding protein, family 1.
  
     0.603
Tlet_0774
PFAM: O-antigen polymerase; KEGG: tma:TM0806 hypothetical protein.
  
     0.574
Tlet_0949
PFAM: YhhN family protein; KEGG: vch:VCA0703 hypothetical protein.
 
     0.565
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.