Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tlet_0953NADH dehydrogenase (quinone); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: tma:TM1425 NADH dehydrogenase I chain F. (626 aa)    
Predicted Functional Partners:
Tlet_0954
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: tma:TM1424 NADH dehydrogenase I chain E.
 0.999
Tlet_1519
TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: sat:SYN_00153 NADH:ubiquinone oxidoreductase 24 kD subunit NuoE.
 0.999
Tlet_0952
Hydrogenase large subunit domain protein; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; hydrogenase large subunit domain protein; KEGG: tma:TM1426 NADH dehydrogenase I chain G.
 
 
 0.997
Tlet_1522
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: tma:TM0012 NADH dehydrogenase I chain E.
 0.997
Tlet_0421
TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tma:TM1640 glutamate synthase (NADPH) small chain.
 
 
 0.996
Tlet_0957
NADH:ubiquinone oxidoreductase 24 kD subunit-like protein; KEGG: tma:TM1420 hypothetical protein.
  
 0.996
Tlet_0956
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: tte:TTE0697 ferredoxin 2.
 
 
 0.994
Tlet_1879
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mja:MJ0033 succinate dehydrogenase flavoprotein subunit.
  
 
 0.991
Tlet_1350
TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; KEGG: tma:TM0201 NADH dehydrogenase I chain G.
 
 
 0.986
Tlet_1520
NADH dehydrogenase (quinone); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: tma:TM0010 NADH dehydrogenase I chain F.
  
 0.965
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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