STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1022PFAM: inner-membrane translocator; KEGG: tte:TTE0460 uncharacterized ABC-type transport system, permease component. (303 aa)    
Predicted Functional Partners:
Tlet_1021
PFAM: inner-membrane translocator; KEGG: bmb:BruAb2_0008 hypothetical ABC transporter, permease protein.
 
 0.995
Tlet_1020
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tko:TK0658 ABC-type transport system, ATPase component.
 
 0.994
Tlet_1019
PFAM: basic membrane lipoprotein; KEGG: bmb:BruAb2_0010 lipoprotein, Bmp family.
 
 
 0.988
Tlet_1045
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0103 simple sugar transport system ATP-binding protein.
 
 0.975
Tlet_0677
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tko:TK0658 ABC-type transport system, ATPase component.
 
 0.971
Tlet_0676
PFAM: basic membrane lipoprotein; KEGG: bmb:BruAb2_0010 lipoprotein, Bmp family.
 
 
 0.963
Tlet_1044
PFAM: basic membrane lipoprotein; KEGG: tma:TM0102 putative simple sugar transport system substrate-binding protein.
 
 
 0.963
Tlet_0337
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cac:CAC0703 sugar ABC-transporter, ATP-ase component.
 
 0.961
Tlet_1046
PFAM: inner-membrane translocator; KEGG: tma:TM0104 simple sugar transport system permease protein.
 
0.953
Tlet_0678
PFAM: inner-membrane translocator; KEGG: sme:SMb20126 putative sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.938
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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