STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1104TIGRFAM: galactokinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: tma:TM1190 galactokinase; Belongs to the GHMP kinase family. GalK subfamily. (352 aa)    
Predicted Functional Partners:
Tlet_1103
TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; KEGG: tma:TM1191 galactose-1-phosphate uridylyltransferase.
 0.999
Tlet_1398
TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: tma:TM0896 galactose-1-phosphate uridylyltransferase.
 0.990
Tlet_1082
PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tma:TM0509 UDP-glucose 4-epimerase, putative.
  
 
 0.967
Tlet_1102
Hypothetical protein.
       0.773
Tlet_1581
PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: rle:pRL90127 putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.758
Tlet_1443
KEGG: tma:TM1192 alpha-galactosidase.
 
  
 0.738
Tlet_1101
KEGG: tma:TM1587 hypothetical protein.
       0.666
Tlet_1100
PFAM: beta-lactamase domain protein; KEGG: tma:TM1162 conserved hypothetical protein; Belongs to the UPF0173 family.
       0.664
Tlet_1296
PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: tma:TM1193 beta-galactosidase.
 
  
 0.606
Tlet_0915
PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: tma:TM1193 beta-galactosidase.
 
  
 0.602
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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