STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1127PFAM: extracellular solute-binding protein family 1; KEGG: pin:Ping_2008 ABC transporter extracellular solute-binding protein, family 1. (409 aa)    
Predicted Functional Partners:
Tlet_1129
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pin:Ping_2009 ABC sugar transporter inner membrane binding protein.
 
  0.993
Tlet_1128
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2863 sugar ABC transporter, permease protein, putative.
 
   0.939
Tlet_1040
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gka:GK3205 ABC transporter (permease).
 
   0.818
Tlet_0405
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_0622 binding-protein-dependent transport systems inner membrane component.
  
   0.600
Tlet_1130
PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: tma:TM1200 transcriptional regulator, LacI family.
  
    0.577
Tlet_0086
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tma:TM1232 multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
  
   0.463
Tlet_0837
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_1631 tungsten transporter, ATP binding protein.
  
   0.463
Tlet_1280
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tma:TM1276 putative multiple sugar transport system ATP-binding protein.
  
   0.463
Tlet_0406
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_0623 binding-protein-dependent transport systems inner membrane component.
 
   0.452
Tlet_1109
PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mll0854 putative multiple sugar transport system substrate-binding protein.
  
     0.434
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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