STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1128PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_2863 sugar ABC transporter, permease protein, putative. (288 aa)    
Predicted Functional Partners:
Tlet_1129
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pin:Ping_2009 ABC sugar transporter inner membrane binding protein.
   0.970
Tlet_1127
PFAM: extracellular solute-binding protein family 1; KEGG: pin:Ping_2008 ABC transporter extracellular solute-binding protein, family 1.
 
   0.941
Tlet_1135
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM0431 multiple sugar transport system permease protein.
  
  
 
0.917
Tlet_0406
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rxy:Rxyl_0623 binding-protein-dependent transport systems inner membrane component.
   0.844
Tlet_1707
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dsy:DSY1500 hypothetical protein.
 
   0.813
Tlet_1803
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_2740 binding-protein-dependent transport systems inner membrane component.
 
   0.812
Tlet_1107
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll0851 putative multiple sugar transport system permease protein.
 
   0.775
Tlet_1580
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2724 binding-protein-dependent transport systems inner membrane component.
 
   0.767
Tlet_1040
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gka:GK3205 ABC transporter (permease).
 
   0.766
Tlet_1842
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pho:PH1036 multiple sugar transport system permease protein.
 
   0.762
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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