STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
Tlet_1168Mannose-1-phosphate guanylyltransferase-like protein; KEGG: tma:TM1033 mannose-1-phosphate guanylyltransferase. (160 aa)    
Predicted Functional Partners:
Tlet_1169
PFAM: sugar transferase; KEGG: tma:TM0632 extracellular polysaccharide biosynthesis-related protein.
 
  
 0.843
Tlet_1906
PFAM: lipopolysaccharide biosynthesis protein; KEGG: tma:TM0644 hypothetical protein.
 
  
 0.818
Tlet_1111
PFAM: sugar transferase; KEGG: tma:TM0632 extracellular polysaccharide biosynthesis-related protein.
 
  
 0.670
Tlet_1170
TIGRFAM: PEP-CTERM locus polysaccharide deactylase; PFAM: polysaccharide deacetylase; KEGG: gme:Gmet_2005 polysaccharide deacetylase.
 
     0.603
Tlet_2020
PFAM: regulatory protein MarR; KEGG: gme:Gmet_2889 hypothetical protein.
  
  
 0.574
Tlet_1989
PFAM: polysaccharide export protein; KEGG: tma:TM0638 polysaccharide export protein, putative.
 
  
 0.522
Tlet_1171
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: det:DET0713 PHP domain protein.
       0.517
Tlet_1006
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tma:TM1548 lipopolysaccharide biosynthesis protein.
  
  
 0.510
Tlet_1172
PFAM: protein of unknown function DUF201; KEGG: mhu:Mhun_0384 ATP-grasp enzyme-like.
       0.443
Tlet_0682
PFAM: mannose-6-phosphate isomerase type I; KEGG: tma:TM0736 mannose-6-phosphate isomerase.
 
  
 0.442
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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