STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1168Mannose-1-phosphate guanylyltransferase-like protein; KEGG: tma:TM1033 mannose-1-phosphate guanylyltransferase. (160 aa)    
Predicted Functional Partners:
Tlet_1169
PFAM: sugar transferase; KEGG: tma:TM0632 extracellular polysaccharide biosynthesis-related protein.
 
  
 0.855
Tlet_1906
PFAM: lipopolysaccharide biosynthesis protein; KEGG: tma:TM0644 hypothetical protein.
 
  
 0.785
Tlet_1111
PFAM: sugar transferase; KEGG: tma:TM0632 extracellular polysaccharide biosynthesis-related protein.
 
  
 0.693
Tlet_2020
PFAM: regulatory protein MarR; KEGG: gme:Gmet_2889 hypothetical protein.
  
  
 0.624
Tlet_1170
TIGRFAM: PEP-CTERM locus polysaccharide deactylase; PFAM: polysaccharide deacetylase; KEGG: gme:Gmet_2005 polysaccharide deacetylase.
 
     0.607
Tlet_1006
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tma:TM1548 lipopolysaccharide biosynthesis protein.
  
  
 0.553
Tlet_1989
PFAM: polysaccharide export protein; KEGG: tma:TM0638 polysaccharide export protein, putative.
 
  
 0.530
Tlet_1171
PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: det:DET0713 PHP domain protein.
       0.519
Tlet_1185
KEGG: ter:Tery_3106 hypothetical protein.
  
  
 0.468
Tlet_0303
TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; KEGG: tma:TM0862 glucose-1-phosphate thymidylyltransferase.
  
  
 0.446
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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