STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1200KEGG: mth:MTH324 hypothetical protein. (122 aa)    
Predicted Functional Partners:
Tlet_1199
TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: protein of unknown function DUF324; KEGG: mth:MTH325 hypothetical protein.
       0.808
Tlet_1203
PFAM: protein of unknown function DUF324; KEGG: mth:MTH327 hypothetical protein.
     
 0.794
Tlet_1205
TIGRFAM: CRISPR-associated protein Csx11; PFAM: Domain of unknown function DUF1814; KEGG: mth:MTH326 hypothetical protein.
     
 0.791
Tlet_1202
TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; KEGG: mma:MM3358 hypothetical protein.
       0.790
Tlet_1201
KEGG: mth:MTH323 hypothetical protein.
     
 0.775
Tlet_1204
KEGG: pab:PAB2321 hypothetical protein.
       0.773
Tlet_1198
Hypothetical protein.
       0.440
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.