Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tlet_1276Hypothetical protein. (413 aa)    
Predicted Functional Partners:
Tlet_1278
PFAM: small multidrug resistance protein; KEGG: pin:Ping_0451 small multidrug resistance protein.
       0.784
Tlet_1277
PFAM: protein of unknown function DUF362; KEGG: mba:Mbar_A1412 hypothetical protein.
       0.773
Tlet_1279
PFAM: UbiA prenyltransferase; KEGG: cth:Cthe_2690 UbiA prenyltransferase.
       0.773
Tlet_1280
PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: tma:TM1276 putative multiple sugar transport system ATP-binding protein.
       0.636
Tlet_1281
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.636
Tlet_1282
TIGRFAM: glutamate formiminotransferase; PFAM: Formiminotransferase domain protein; Formiminotransferase domain protein; KEGG: tma:TM0843 formiminotransferase- cyclodeaminase/formiminotetrahydrofolate cyclodeaminase, putative.
       0.470
Tlet_1283
TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: fnu:FN0740 imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
       0.470
rlmH
Protein of unknown function DUF163; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.
       0.470
Tlet_1285
PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: tma:TM0845 hemolysin-related protein.
       0.451
Tlet_1286
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
       0.451
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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