STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tlet_1294Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: tma:TM1200 transcriptional regulator, LacI family. (347 aa)    
Predicted Functional Partners:
Tlet_1295
KEGG: sme:SMb20968 hypothetical protein.
       0.782
Tlet_1296
PFAM: glycoside hydrolase family 42 domain 5 loop region; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: tma:TM1193 beta-galactosidase.
     
 0.782
Tlet_1297
Hypothetical protein.
       0.773
Tlet_1298
PFAM: protein of unknown function DUF340 membrane; KEGG: fnu:FN1083 putative surface protein.
       0.773
Tlet_1293
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0318 sugar ABC transporter permease.
       0.544
Tlet_1292
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC0317 sugar ABC transporter permease.
  
    0.543
Tlet_1291
PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20971 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor.
  
    0.438
Tlet_1300
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tko:TK0159 ABC-type iron(III) transport system, permease component.
       0.436
Tlet_1299
TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1; KEGG: pfu:PF1751 probable solute binding lipoprotein.
       0.424
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
    
   0.410
Your Current Organism:
Pseudothermotoga lettingae
NCBI taxonomy Id: 416591
Other names: P. lettingae TMO, Pseudothermotoga lettingae TMO, Pseudothermotoga lettingae str. TMO, Pseudothermotoga lettingae strain TMO, Thermotoga lettingae TMO, Thermotoga sp. TMO
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